<HTML><HEAD><TITLE>Motif 3</TITLE></HEAD>
<H2>Information for 3-TCCATCTGGGTA (Motif 3)</H2>
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<TABLE border="1" cellpading="0" cellspacing="0">
<TR><TD>p-value:</TD><TD>1e-4</TD></TR>
<TR><TD>log p-value:</TD><TD>-1.126e+01</TD></TR>
<TR><TD>Information Content per bp:</TD><TD>1.530</TD></TR>
<TR><TD>Number of Target Sequences with motif</TD><TD>1.0</TD></TR>
<TR><TD>Percentage of Target Sequences with motif</TD><TD>100.00%</TD></TR>
<TR><TD>Number of Background Sequences with motif</TD><TD>0.0</TD></TR>
<TR><TD>Percentage of Background Sequences with motif</TD><TD>0.00%</TD></TR>
<TR><TD>Average Position of motif in Targets</TD><TD>39.0 +/- 0.0bp</TD></TR>
<TR><TD>Average Position of motif in Background</TD><TD>0.0 +/- 0.0bp</TD></TR>
<TR><TD>Strand Bias (log2 ratio + to - strand density)</TD><TD>10.0</TD></TR>
<TR><TD>Multiplicity (# of sites on avg that occur together)</TD><TD>1.00</TD></TR>
<TR><TD>Motif File:</TD><TD><A target="_blank" HREF="motif3.motif">file (matrix)</A><BR/><A target="_blank" HREF="motif3RV.motif">reverse opposite</A></TD></TR>
<TR><TD>SVG Files for Logos:</TD><TD><A HREF="motif3.logo.svg">forward logo</A><BR/><A HREF="motif3RV.logo.svg">reverse opposite</A></TD></TR>
</TABLE>
<H3>Matches to Known Motifs</H3>
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<TR><TD>
<H4>NEUROG2(var.2)/MA1642.1/Jaspar</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>1</TD></TR>
<TR><TD>Score:</TD><TD>0.72</TD</TR>
<TR><TD>Offset:</TD><TD>-1</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">-TCCATCTGGGTA</FONT><BR><FONT face="courier">NNCCATCTGTNNN</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR>
<TR><TD>
<H4>HAND2/MA1638.1/Jaspar</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>2</TD></TR>
<TR><TD>Score:</TD><TD>0.71</TD</TR>
<TR><TD>Offset:</TD><TD>0</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">TCCATCTGGGTA</FONT><BR><FONT face="courier">NNCATCTGNN--</FONT></TD></TR></TABLE>
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</TD></TR></TABLE>
</TD></TR>
<TR><TD>
<H4>NEUROD1/MA1109.1/Jaspar</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>3</TD></TR>
<TR><TD>Score:</TD><TD>0.70</TD</TR>
<TR><TD>Offset:</TD><TD>-2</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">--TCCATCTGGGTA</FONT><BR><FONT face="courier">NNNCCATCTGTNN-</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR></TABLE>
</TD></TR>
<TR><TD>
<H4>TWIST1/MA1123.2/Jaspar</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>4</TD></TR>
<TR><TD>Score:</TD><TD>0.69</TD</TR>
<TR><TD>Offset:</TD><TD>-1</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">-TCCATCTGGGTA</FONT><BR><FONT face="courier">NNACATCTGGNNN</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR>
<TR><TD>
<H4>BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>5</TD></TR>
<TR><TD>Score:</TD><TD>0.66</TD</TR>
<TR><TD>Offset:</TD><TD>1</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">TCCATCTGGGTA</FONT><BR><FONT face="courier">-MCAGCTGKTN-</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR>
<TR><TD>
<H4>NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>6</TD></TR>
<TR><TD>Score:</TD><TD>0.65</TD</TR>
<TR><TD>Offset:</TD><TD>0</TD</TR>
<TR><TD>Orientation:</TD><TD>forward strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">TCCATCTGGGTA</FONT><BR><FONT face="courier">GCCATCTGTT--</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR></TABLE>
</TD></TR>
<TR><TD>
<H4>TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>7</TD></TR>
<TR><TD>Score:</TD><TD>0.65</TD</TR>
<TR><TD>Offset:</TD><TD>0</TD</TR>
<TR><TD>Orientation:</TD><TD>forward strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">TCCATCTGGGTA</FONT><BR><FONT face="courier">SMCATCTGKH--</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR></TABLE>
</TD></TR>
<TR><TD>
<H4>NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>8</TD></TR>
<TR><TD>Score:</TD><TD>0.65</TD</TR>
<TR><TD>Offset:</TD><TD>0</TD</TR>
<TR><TD>Orientation:</TD><TD>forward strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">TCCATCTGGGTA</FONT><BR><FONT face="courier">ACCATCTGTT--</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR>
<TR><TD>
<H4>SPDEF/MA0686.1/Jaspar</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>9</TD></TR>
<TR><TD>Score:</TD><TD>0.64</TD</TR>
<TR><TD>Offset:</TD><TD>0</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">TCCATCTGGGTA</FONT><BR><FONT face="courier">TACATCCGGGT-</FONT></TD></TR></TABLE>
</TD><TD>
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<TR><TD>
<H4>Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>10</TD></TR>
<TR><TD>Score:</TD><TD>0.63</TD</TR>
<TR><TD>Offset:</TD><TD>0</TD</TR>
<TR><TD>Orientation:</TD><TD>forward strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">TCCATCTGGGTA</FONT><BR><FONT face="courier">RCCATMTGTT--</FONT></TD></TR></TABLE>
</TD><TD>
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